Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rundc3aO08576 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rundc3aO08576 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rundc3aO08576 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rundc3aO08576 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rundc3aO08576 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rundc3aO08576 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rundc3aO08576 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rundc3aO08576 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.97■□□□□ 0.47
Rundc3aO08576 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rundc3aO08576 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.97■□□□□ 0.47
Rundc3aO08576 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rundc3aO08576 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rundc3aO08576 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.97■□□□□ 0.47
Rundc3aO08576 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.96■□□□□ 0.47
Rundc3aO08576 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.96■□□□□ 0.47
Rundc3aO08576 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rundc3aO08576 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.96■□□□□ 0.47
Rundc3aO08576 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rundc3aO08576 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rundc3aO08576 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rundc3aO08576 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rundc3aO08576 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.95■□□□□ 0.46
Rundc3aO08576 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.95■□□□□ 0.46
Rundc3aO08576 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.95■□□□□ 0.46
Rundc3aO08576 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.95■□□□□ 0.46
Rundc3aO08576 Gm43060-201ENSMUST00000200621 289 ntBASIC17.95■□□□□ 0.46
Rundc3aO08576 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.95■□□□□ 0.46
Rundc3aO08576 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rundc3aO08576 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rundc3aO08576 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rundc3aO08576 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rundc3aO08576 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rundc3aO08576 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rundc3aO08576 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rundc3aO08576 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.94■□□□□ 0.46
Rundc3aO08576 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.94■□□□□ 0.46
Rundc3aO08576 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rundc3aO08576 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.94■□□□□ 0.46
Rundc3aO08576 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.94■□□□□ 0.46
Rundc3aO08576 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rundc3aO08576 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Rundc3aO08576 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.94■□□□□ 0.46
Rundc3aO08576 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rundc3aO08576 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.93■□□□□ 0.46
Rundc3aO08576 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.93■□□□□ 0.46
Rundc3aO08576 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rundc3aO08576 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rundc3aO08576 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rundc3aO08576 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rundc3aO08576 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rundc3aO08576 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rundc3aO08576 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rundc3aO08576 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.92■□□□□ 0.46
Rundc3aO08576 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rundc3aO08576 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rundc3aO08576 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rundc3aO08576 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rundc3aO08576 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.92■□□□□ 0.46
Rundc3aO08576 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Rundc3aO08576 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.92■□□□□ 0.46
Rundc3aO08576 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.92■□□□□ 0.46
Rundc3aO08576 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rundc3aO08576 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rundc3aO08576 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rundc3aO08576 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rundc3aO08576 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rundc3aO08576 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rundc3aO08576 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms