Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Gm37935-201ENSMUST00000192012 982 ntBASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc188F6WEU2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Mir3081-201ENSMUST00000175305 84 ntBASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc188F6WEU2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc188F6WEU2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Gm34391-201ENSMUST00000203706 907 ntBASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc188F6WEU2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc188F6WEU2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc188F6WEU2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.76■□□□□ 0.59
Ccdc188F6WEU2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Gm27525-201ENSMUST00000184465 107 ntBASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Gm21559-201ENSMUST00000220638 855 ntBASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Gm8587-201ENSMUST00000076538 843 ntBASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc188F6WEU2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Gm5864-201ENSMUST00000202263 970 ntBASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccdc188F6WEU2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc188F6WEU2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms