Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cntnap3E9PY62 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cntnap3E9PY62 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Gm18025-201ENSMUST00000221733 862 ntBASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cntnap3E9PY62 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cntnap3E9PY62 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap3E9PY62 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cntnap3E9PY62 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cntnap3E9PY62 Gm25016-201ENSMUST00000158399 131 ntBASIC20.35■□□□□ 0.85
Cntnap3E9PY62 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
Cntnap3E9PY62 Gm27704-201ENSMUST00000185094 107 ntBASIC20.35■□□□□ 0.85
Cntnap3E9PY62 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap3E9PY62 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cntnap3E9PY62 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Mzt1-203ENSMUST00000227948 952 ntBASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntnap3E9PY62 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cntnap3E9PY62 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Cntnap3E9PY62 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cntnap3E9PY62 Mir5130-201ENSMUST00000175160 84 ntBASIC20.33■□□□□ 0.85
Cntnap3E9PY62 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cntnap3E9PY62 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cntnap3E9PY62 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cntnap3E9PY62 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cntnap3E9PY62 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cntnap3E9PY62 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cntnap3E9PY62 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cntnap3E9PY62 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Gm17807-201ENSMUST00000186869 298 ntBASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Gm37292-201ENSMUST00000192062 758 ntBASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntnap3E9PY62 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntnap3E9PY62 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntnap3E9PY62 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms