Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.71■□□□□ 0.27
Sptbn4E9PX29 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptbn4E9PX29 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.71■□□□□ 0.26
Sptbn4E9PX29 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sptbn4E9PX29 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.71■□□□□ 0.26
Sptbn4E9PX29 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sptbn4E9PX29 Zfp783-201ENSMUST00000095946 670 ntBASIC16.71■□□□□ 0.26
Sptbn4E9PX29 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Gm27459-201ENSMUST00000184860 107 ntBASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptbn4E9PX29 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Mir5130-201ENSMUST00000175160 84 ntBASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptbn4E9PX29 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.68■□□□□ 0.26
Sptbn4E9PX29 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Gm38027-201ENSMUST00000192315 235 ntBASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Gm5864-201ENSMUST00000202263 970 ntBASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Birc2-201ENSMUST00000054878 378 ntBASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sptbn4E9PX29 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Gm7063-201ENSMUST00000186840 981 ntBASIC16.66■□□□□ 0.26
Sptbn4E9PX29 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Mir8098-201ENSMUST00000184011 137 ntBASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sptbn4E9PX29 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms