Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lonrf1D3YY23 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lonrf1D3YY23 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lonrf1D3YY23 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lonrf1D3YY23 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Lonrf1D3YY23 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lonrf1D3YY23 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lonrf1D3YY23 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lonrf1D3YY23 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lonrf1D3YY23 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lonrf1D3YY23 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Lonrf1D3YY23 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lonrf1D3YY23 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19■□□□□ 0.63
Lonrf1D3YY23 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lonrf1D3YY23 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Lonrf1D3YY23 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19■□□□□ 0.63
Lonrf1D3YY23 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lonrf1D3YY23 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lonrf1D3YY23 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lonrf1D3YY23 Dmtn-207ENSMUST00000228001 2437 ntBASIC19■□□□□ 0.63
Lonrf1D3YY23 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lonrf1D3YY23 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lonrf1D3YY23 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19■□□□□ 0.63
Lonrf1D3YY23 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Gm9988-201ENSMUST00000069786 435 ntBASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lonrf1D3YY23 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lonrf1D3YY23 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lonrf1D3YY23 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lonrf1D3YY23 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lonrf1D3YY23 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lonrf1D3YY23 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lonrf1D3YY23 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lonrf1D3YY23 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lonrf1D3YY23 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms