Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim30cD3YVI9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Gm9988-201ENSMUST00000069786 435 ntBASIC20.08■□□□□ 0.81
Trim30cD3YVI9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim30cD3YVI9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim30cD3YVI9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim30cD3YVI9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim30cD3YVI9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim30cD3YVI9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim30cD3YVI9 Gm42642-201ENSMUST00000200683 355 ntBASIC20.07■□□□□ 0.8
Trim30cD3YVI9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim30cD3YVI9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim30cD3YVI9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim30cD3YVI9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim30cD3YVI9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim30cD3YVI9 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.07■□□□□ 0.8
Trim30cD3YVI9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim30cD3YVI9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim30cD3YVI9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Gm42778-201ENSMUST00000199644 553 ntBASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim30cD3YVI9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim30cD3YVI9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms