Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 Gm715-201ENSMUST00000117865 831 ntBASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.9■□□□□ 0.78
Ptchd4B9EKX1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ptchd4B9EKX1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Zfp783-201ENSMUST00000095946 670 ntBASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ptchd4B9EKX1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Mir1199-201ENSMUST00000117015 119 ntBASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptchd4B9EKX1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptchd4B9EKX1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Mtag2-201ENSMUST00000058665 714 ntBASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptchd4B9EKX1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd4B9EKX1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ptchd4B9EKX1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.83■□□□□ 0.77
Ptchd4B9EKX1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.83■□□□□ 0.77
Ptchd4B9EKX1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd4B9EKX1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd4B9EKX1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ptchd4B9EKX1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ptchd4B9EKX1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ptchd4B9EKX1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ptchd4B9EKX1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ptchd4B9EKX1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd4B9EKX1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms