Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.13■□□□□ 0.97
Syce3B5KM66 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Syce3B5KM66 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.12■□□□□ 0.97
Syce3B5KM66 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Syce3B5KM66 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Syce3B5KM66 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.12■□□□□ 0.97
Syce3B5KM66 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Syce3B5KM66 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.12■□□□□ 0.97
Syce3B5KM66 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Syce3B5KM66 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Syce3B5KM66 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syce3B5KM66 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syce3B5KM66 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Syce3B5KM66 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Syce3B5KM66 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.11■□□□□ 0.97
Syce3B5KM66 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Syce3B5KM66 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syce3B5KM66 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.11■□□□□ 0.97
Syce3B5KM66 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syce3B5KM66 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syce3B5KM66 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syce3B5KM66 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Syce3B5KM66 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syce3B5KM66 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.1■□□□□ 0.97
Syce3B5KM66 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.1■□□□□ 0.97
Syce3B5KM66 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Syce3B5KM66 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syce3B5KM66 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.1■□□□□ 0.97
Syce3B5KM66 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Syce3B5KM66 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syce3B5KM66 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Syce3B5KM66 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Syce3B5KM66 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Syce3B5KM66 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Syce3B5KM66 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.08■□□□□ 0.97
Syce3B5KM66 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Syce3B5KM66 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.08■□□□□ 0.97
Syce3B5KM66 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Syce3B5KM66 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Syce3B5KM66 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Syce3B5KM66 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syce3B5KM66 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syce3B5KM66 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syce3B5KM66 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syce3B5KM66 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.07■□□□□ 0.96
Syce3B5KM66 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syce3B5KM66 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Syce3B5KM66 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syce3B5KM66 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Syce3B5KM66 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syce3B5KM66 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Syce3B5KM66 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Syce3B5KM66 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.06■□□□□ 0.96
Syce3B5KM66 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Syce3B5KM66 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Syce3B5KM66 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Syce3B5KM66 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syce3B5KM66 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 160.7 ms