Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Gm12887B1AVM1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Fst-202ENSMUST00000223640 2612 ntBASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Gm12887B1AVM1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Gm12887B1AVM1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Gm12887B1AVM1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Gm12887B1AVM1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.96□□□□□ -0.02
Gm12887B1AVM1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Gm12887B1AVM1 Cap2-205ENSMUST00000225824 1634 ntBASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Gm12887B1AVM1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Gm12887B1AVM1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm12887B1AVM1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Gm7417-201ENSMUST00000192950 473 ntBASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm12887B1AVM1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm12887B1AVM1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.9□□□□□ -0.02
Gm12887B1AVM1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Gm12887B1AVM1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm12887B1AVM1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms