Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm6659-201ENSMUST00000174752 547 ntBASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col4a6B1AVK5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col4a6B1AVK5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Golph3-202ENSMUST00000226517 2359 ntBASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col4a6B1AVK5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Mir6349-201ENSMUST00000184059 97 ntBASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col4a6B1AVK5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col4a6B1AVK5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col4a6B1AVK5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Mir2861-201ENSMUST00000175539 82 ntBASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col4a6B1AVK5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col4a6B1AVK5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms