Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pramef20B1ARV6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Pramef20B1ARV6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Gm7290-201ENSMUST00000104990 617 ntBASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Gm12918-201ENSMUST00000120234 636 ntBASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Gm15710-201ENSMUST00000121821 636 ntBASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Gm5075-201ENSMUST00000196916 622 ntBASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pramef20B1ARV6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Gm4968-201ENSMUST00000071458 858 ntBASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.15■□□□□ 0.5
Pramef20B1ARV6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pramef20B1ARV6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Gm6420-201ENSMUST00000193885 723 ntBASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pramef20B1ARV6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Gm13534-201ENSMUST00000121169 513 ntBASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.13■□□□□ 0.49
Pramef20B1ARV6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pramef20B1ARV6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms