Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1aA2APX8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.46■□□□□ 0.71
Scn1aA2APX8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1aA2APX8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1aA2APX8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1aA2APX8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn1aA2APX8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.46■□□□□ 0.71
Scn1aA2APX8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn1aA2APX8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Gm11249-201ENSMUST00000117071 859 ntBASIC19.44■□□□□ 0.7
Scn1aA2APX8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Scn1aA2APX8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Gm11927-201ENSMUST00000118472 759 ntBASIC19.44■□□□□ 0.7
Scn1aA2APX8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn1aA2APX8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1aA2APX8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn1aA2APX8 Zfp783-201ENSMUST00000095946 670 ntBASIC19.43■□□□□ 0.7
Scn1aA2APX8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.43■□□□□ 0.7
Scn1aA2APX8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn1aA2APX8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.41■□□□□ 0.7
Scn1aA2APX8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.41■□□□□ 0.7
Scn1aA2APX8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.41■□□□□ 0.7
Scn1aA2APX8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1aA2APX8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1aA2APX8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1aA2APX8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Scn1aA2APX8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scn1aA2APX8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1aA2APX8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1aA2APX8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn1aA2APX8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Scn1aA2APX8 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.39■□□□□ 0.7
Scn1aA2APX8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Scn1aA2APX8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Gm13158-201ENSMUST00000122007 736 ntBASIC19.39■□□□□ 0.69
Scn1aA2APX8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.39■□□□□ 0.69
Scn1aA2APX8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.39■□□□□ 0.69
Scn1aA2APX8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.38■□□□□ 0.69
Scn1aA2APX8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn1aA2APX8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn1aA2APX8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn1aA2APX8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn1aA2APX8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn1aA2APX8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn1aA2APX8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.38■□□□□ 0.69
Scn1aA2APX8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms