Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Shroom2A2ALU4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC29.5■■■□□ 2.31
Shroom2A2ALU4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Shroom2A2ALU4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Shroom2A2ALU4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Shroom2A2ALU4 Mir3081-201ENSMUST00000175305 84 ntBASIC29.49■■■□□ 2.31
Shroom2A2ALU4 Gm32699-201ENSMUST00000221728 1988 ntBASIC29.49■■■□□ 2.31
Shroom2A2ALU4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Shroom2A2ALU4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC29.49■■■□□ 2.31
Shroom2A2ALU4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Shroom2A2ALU4 Gm6190-201ENSMUST00000220683 1374 ntBASIC29.49■■■□□ 2.31
Shroom2A2ALU4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Shroom2A2ALU4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Shroom2A2ALU4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Shroom2A2ALU4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Shroom2A2ALU4 AC166341.7-201ENSMUST00000221698 126 ntBASIC29.47■■■□□ 2.31
Shroom2A2ALU4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Shroom2A2ALU4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC29.46■■■□□ 2.31
Shroom2A2ALU4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Shroom2A2ALU4 Gm16061-201ENSMUST00000122167 857 ntBASIC29.46■■■□□ 2.31
Shroom2A2ALU4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Shroom2A2ALU4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Shroom2A2ALU4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC29.46■■■□□ 2.31
Shroom2A2ALU4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Shroom2A2ALU4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Shroom2A2ALU4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Shroom2A2ALU4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC29.45■■■□□ 2.31
Shroom2A2ALU4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Shroom2A2ALU4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC29.45■■■□□ 2.31
Shroom2A2ALU4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC29.45■■■□□ 2.31
Shroom2A2ALU4 Gm28659-201ENSMUST00000188013 759 ntBASIC29.45■■■□□ 2.31
Shroom2A2ALU4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC29.45■■■□□ 2.31
Shroom2A2ALU4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Shroom2A2ALU4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
Shroom2A2ALU4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Mir6349-201ENSMUST00000184059 97 ntBASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Shroom2A2ALU4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Shroom2A2ALU4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Shroom2A2ALU4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Gm27525-201ENSMUST00000184465 107 ntBASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC29.42■■■□□ 2.3
Shroom2A2ALU4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Shroom2A2ALU4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Shroom2A2ALU4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
Shroom2A2ALU4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC29.41■■■□□ 2.3
Shroom2A2ALU4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC29.41■■■□□ 2.3
Shroom2A2ALU4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC29.41■■■□□ 2.3
Shroom2A2ALU4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Shroom2A2ALU4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
Shroom2A2ALU4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Shroom2A2ALU4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Shroom2A2ALU4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC29.4■■■□□ 2.3
Shroom2A2ALU4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Shroom2A2ALU4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC29.4■■■□□ 2.3
Shroom2A2ALU4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Shroom2A2ALU4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC29.4■■■□□ 2.3
Shroom2A2ALU4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Shroom2A2ALU4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Shroom2A2ALU4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Shroom2A2ALU4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC29.39■■■□□ 2.3
Shroom2A2ALU4 Gm21559-201ENSMUST00000220638 855 ntBASIC29.39■■■□□ 2.3
Shroom2A2ALU4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC29.39■■■□□ 2.3
Shroom2A2ALU4 Gm8587-201ENSMUST00000076538 843 ntBASIC29.39■■■□□ 2.3
Shroom2A2ALU4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Shroom2A2ALU4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms