Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Gm43060-201ENSMUST00000200621 289 ntBASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc112A0AUP1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc112A0AUP1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ccdc112A0AUP1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc112A0AUP1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Ccdc112A0AUP1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc112A0AUP1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc112A0AUP1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc112A0AUP1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.06■□□□□ 0.96
Ccdc112A0AUP1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc112A0AUP1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc112A0AUP1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms