Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ccdc194A0A140LIT1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc194A0A140LIT1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc194A0A140LIT1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc194A0A140LIT1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc194A0A140LIT1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc194A0A140LIT1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Gm38205-201ENSMUST00000192243 258 ntBASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc194A0A140LIT1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc194A0A140LIT1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc194A0A140LIT1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc194A0A140LIT1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc194A0A140LIT1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc194A0A140LIT1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc194A0A140LIT1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc194A0A140LIT1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc194A0A140LIT1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc194A0A140LIT1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc194A0A140LIT1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc194A0A140LIT1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc194A0A140LIT1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc194A0A140LIT1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ccdc194A0A140LIT1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc194A0A140LIT1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc194A0A140LIT1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc194A0A140LIT1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms