Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv29A0A0G2LB96 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv29A0A0G2LB96 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv29A0A0G2LB96 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv29A0A0G2LB96 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv29A0A0G2LB96 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv29A0A0G2LB96 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv29A0A0G2LB96 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv29A0A0G2LB96 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Gm43173-201ENSMUST00000202246 593 ntBASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trbv29A0A0G2LB96 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Gm8493-201ENSMUST00000196881 489 ntBASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Gm13241-201ENSMUST00000094493 780 ntBASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv29A0A0G2LB96 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv29A0A0G2LB96 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms