Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv16A0A0B4J1H3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv16A0A0B4J1H3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv16A0A0B4J1H3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv16A0A0B4J1H3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv16A0A0B4J1H3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trbv16A0A0B4J1H3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm13241-201ENSMUST00000094493 780 ntBASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trbv16A0A0B4J1H3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm43173-201ENSMUST00000202246 593 ntBASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.37□□□□□ -0.27
Trbv16A0A0B4J1H3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm8493-201ENSMUST00000196881 489 ntBASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trbv16A0A0B4J1H3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.35□□□□□ -0.27
Trbv16A0A0B4J1H3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trbv16A0A0B4J1H3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms