Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trbv3A0A0A6YYE2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv3A0A0A6YYE2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv3A0A0A6YYE2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trbv3A0A0A6YYE2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv3A0A0A6YYE2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv3A0A0A6YYE2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms