Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gm13158-201ENSMUST00000122007 736 ntBASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-43A0A0A6YXN5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Gm11927-201ENSMUST00000118472 759 ntBASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Gm37805-201ENSMUST00000192612 1094 ntBASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-43A0A0A6YXN5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms