Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6d-7A0A075B6B0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6d-7A0A075B6B0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav6d-7A0A075B6B0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm9988-201ENSMUST00000069786 435 ntBASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav6d-7A0A075B6B0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6d-7A0A075B6B0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms