Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4d-3A0A075B625 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4d-3A0A075B625 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.39
Trav4d-3A0A075B625 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav4d-3A0A075B625 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4d-3A0A075B625 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.57□□□□□ -0.4
Trav4d-3A0A075B625 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Gm7332-201ENSMUST00000118351 454 ntBASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms