Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Smad6-203ENSMUST00000179458 273 ntBASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-1A0A075B5Z8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-1A0A075B5Z8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-1A0A075B5Z8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-1A0A075B5Z8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-1A0A075B5Z8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-1A0A075B5Z8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-1A0A075B5Z8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms