Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm6746-201ENSMUST00000108774 483 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm6490-201ENSMUST00000111862 461 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm11416-201ENSMUST00000119111 863 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm12642-201ENSMUST00000121098 876 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm16523-201ENSMUST00000121253 592 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm14612-201ENSMUST00000121522 881 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm11895-201ENSMUST00000122165 467 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm4835-201ENSMUST00000155839 972 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm24824-201ENSMUST00000175097 78 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm23945-201ENSMUST00000179609 92 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm9423-201ENSMUST00000183173 997 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm37481-201ENSMUST00000195176 403 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm37585-201ENSMUST00000195440 280 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm42932-201ENSMUST00000197280 744 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm20274-201ENSMUST00000206967 584 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Snora9-201ENSMUST00000082579 133 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim3Q9R1R2 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.29
Trim3Q9R1R2 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Trim3Q9R1R2 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.96□□□□□ -1.29
Trim3Q9R1R2 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Trim3Q9R1R2 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim3Q9R1R2 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim3Q9R1R2 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm22439-201ENSMUST00000104048 132 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm23834-201ENSMUST00000104436 129 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm25725-201ENSMUST00000104528 130 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm13229-201ENSMUST00000118238 340 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm14584-201ENSMUST00000118956 637 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm12632-201ENSMUST00000121223 495 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm26182-201ENSMUST00000157688 116 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm24369-201ENSMUST00000175387 96 ntBASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim3Q9R1R2 Gm5181-201ENSMUST00000183140 971 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms