Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm45497-201ENSMUST00000211701 740 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 AV026068-219ENSMUST00000224148 933 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm8662-201ENSMUST00000118644 574 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm14584-201ENSMUST00000118956 637 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm2709-201ENSMUST00000142979 350 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm4785-201ENSMUST00000191025 751 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm43235-201ENSMUST00000200121 297 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm5314-201ENSMUST00000204852 466 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm18960-201ENSMUST00000222962 713 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Diaph3-204ENSMUST00000226254 682 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm24924-201ENSMUST00000084007 164 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Upk3aQ9JKX8 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm26016-201ENSMUST00000104403 129 ntBASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm22024-201ENSMUST00000122733 287 ntBASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm22035-201ENSMUST00000157284 228 ntBASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm3208-201ENSMUST00000168281 427 ntBASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Gm27018-201ENSMUST00000181136 225 ntBASIC7.03□□□□□ -1.28
Upk3aQ9JKX8 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 169.5 ms