Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm13163-201ENSMUST00000119875 336 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm11343-201ENSMUST00000120579 599 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm5611-201ENSMUST00000164523 852 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm3611-201ENSMUST00000173687 877 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Mir6403-201ENSMUST00000185007 129 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm29435-201ENSMUST00000191310 689 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm17965-201ENSMUST00000193904 517 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm19035-202ENSMUST00000194575 959 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 AC157650.2-201ENSMUST00000224666 328 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.65□□□□□ -1.02
Ccdc47Q9D024 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Ccdc47Q9D024 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc47Q9D024 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc47Q9D024 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.65□□□□□ -1.03
Ccdc47Q9D024 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Ccdc47Q9D024 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm6746-201ENSMUST00000108774 483 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm27458-201ENSMUST00000185108 121 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm44192-201ENSMUST00000204195 556 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm8058-201ENSMUST00000217247 587 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ccdc47Q9D024 Klf5-202ENSMUST00000226784 2852 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Gm25276-201ENSMUST00000104300 124 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Gm38063-201ENSMUST00000193990 342 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Klra13-ps-203ENSMUST00000204367 850 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Gm18484-201ENSMUST00000204389 991 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms