Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm43488-201ENSMUST00000198874 2504 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm22470-201ENSMUST00000104117 130 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm13622-201ENSMUST00000120658 433 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm22408-201ENSMUST00000174925 65 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm27542-201ENSMUST00000184184 256 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Mir6403-201ENSMUST00000185007 129 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm27596-201ENSMUST00000185061 83 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm8004-201ENSMUST00000187782 617 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm43555-201ENSMUST00000196588 310 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm26413-201ENSMUST00000196783 126 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm18995-201ENSMUST00000202981 520 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm18972-201ENSMUST00000218873 630 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.68□□□□□ -1.02
Nup88Q8CEC0 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm13229-201ENSMUST00000118238 340 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm13521-201ENSMUST00000118922 866 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm26046-201ENSMUST00000157312 166 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm17973-201ENSMUST00000174509 520 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm29214-201ENSMUST00000190216 570 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm43558-201ENSMUST00000200155 210 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm8058-201ENSMUST00000217247 587 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm40853-201ENSMUST00000221342 582 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm46379-201ENSMUST00000222551 265 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm9255-201ENSMUST00000223225 581 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Diaph3-204ENSMUST00000226254 682 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.67□□□□□ -1.02
Nup88Q8CEC0 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms