Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Grik1-209ENSMUST00000227986 2942 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm6490-201ENSMUST00000111862 461 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm8662-201ENSMUST00000118644 574 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm22206-201ENSMUST00000158612 116 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm7393-201ENSMUST00000172650 739 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm37585-201ENSMUST00000195440 280 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm43212-201ENSMUST00000198208 394 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm9497-201ENSMUST00000199908 538 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 AC106830.1-201ENSMUST00000228032 1003 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Gm17199-201ENSMUST00000097296 416 ntBASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Trim9Q8C7M3 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm14202-201ENSMUST00000120121 311 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm23079-201ENSMUST00000157847 117 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm27018-201ENSMUST00000181136 225 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm28416-201ENSMUST00000188334 292 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm42734-201ENSMUST00000201656 878 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm44566-201ENSMUST00000207638 304 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Snora9-201ENSMUST00000082579 133 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Gm24924-201ENSMUST00000084007 164 ntBASIC8.06□□□□□ -1.12
Trim9Q8C7M3 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Trim9Q8C7M3 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms