Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trub1Q8C0D0 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.52□□□□□ -1.2
Trub1Q8C0D0 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Trub1Q8C0D0 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Trub1Q8C0D0 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Trub1Q8C0D0 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Trub1Q8C0D0 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.52□□□□□ -1.2
Trub1Q8C0D0 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC7.52□□□□□ -1.2
Trub1Q8C0D0 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm14248-201ENSMUST00000117790 544 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm11383-201ENSMUST00000121346 807 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm24647-201ENSMUST00000157112 113 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm22882-201ENSMUST00000157749 124 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm22206-201ENSMUST00000158612 116 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm7393-201ENSMUST00000172650 739 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm27018-201ENSMUST00000181136 225 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm28416-201ENSMUST00000188334 292 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm28952-201ENSMUST00000189285 681 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm43212-201ENSMUST00000198208 394 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm9497-201ENSMUST00000199908 538 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm44566-201ENSMUST00000207638 304 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 AC139209.2-201ENSMUST00000227680 1208 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Snora9-201ENSMUST00000082579 133 ntBASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trub1Q8C0D0 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm11880-201ENSMUST00000117612 399 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm15665-201ENSMUST00000119116 847 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm22024-201ENSMUST00000122733 287 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm23079-201ENSMUST00000157847 117 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm6610-201ENSMUST00000186324 358 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm37585-201ENSMUST00000195440 280 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm42734-201ENSMUST00000201656 878 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm18484-201ENSMUST00000204389 991 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC7.51□□□□□ -1.21
Trub1Q8C0D0 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms