Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Rpap2-203ENSMUST00000112651 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm14904-201ENSMUST00000117067 335 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Mup-ps14-201ENSMUST00000118437 532 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm14489-201ENSMUST00000120868 901 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm14612-201ENSMUST00000121522 881 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm11263-201ENSMUST00000121853 749 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm12967-201ENSMUST00000122147 289 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm14200-201ENSMUST00000122256 192 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm7991-201ENSMUST00000168668 591 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm6536-201ENSMUST00000171180 615 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Mir6989-201ENSMUST00000184812 65 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm2429-201ENSMUST00000194635 586 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm20072-201ENSMUST00000202231 292 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm18598-201ENSMUST00000207724 597 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 AC069561.2-201ENSMUST00000217596 420 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col8a1Q00780 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 AC124196.1-201ENSMUST00000225970 1032 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm20900-201ENSMUST00000078729 472 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm25189-201ENSMUST00000083911 164 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Col8a1Q00780 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC6.75□□□□□ -1.33
Col8a1Q00780 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col8a1Q00780 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.75□□□□□ -1.33
Col8a1Q00780 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm15739-201ENSMUST00000118049 872 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm12713-201ENSMUST00000118404 764 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm14103-201ENSMUST00000119075 366 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm5759-201ENSMUST00000119203 811 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm9378-201ENSMUST00000120315 471 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm13358-201ENSMUST00000121427 569 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm17138-201ENSMUST00000165702 459 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm8164-201ENSMUST00000169120 1192 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm26179-201ENSMUST00000177723 132 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm5350-201ENSMUST00000182057 1002 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms