Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Gm24143-201ENSMUST00000082633 145 ntBASIC8.32□□□□□ -1.08
Sh3bp1P55194 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Gm43180-201ENSMUST00000197541 2886 ntBASIC8.32□□□□□ -1.08
Sh3bp1P55194 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.32□□□□□ -1.08
Sh3bp1P55194 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.32□□□□□ -1.08
Sh3bp1P55194 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Sh3bp1P55194 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm22426-201ENSMUST00000103811 96 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm24472-201ENSMUST00000104484 132 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm15192-201ENSMUST00000121005 293 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 BC002163-201ENSMUST00000121906 319 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm14328-201ENSMUST00000122178 408 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm29144-201ENSMUST00000189235 339 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm29238-201ENSMUST00000189709 695 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm28607-201ENSMUST00000190142 339 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm28121-201ENSMUST00000191420 339 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm38047-201ENSMUST00000193690 1133 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm42558-201ENSMUST00000200982 265 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm20302-201ENSMUST00000080671 275 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm26264-201ENSMUST00000083278 159 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm45251-201ENSMUST00000209486 1465 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.31□□□□□ -1.08
Sh3bp1P55194 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sh3bp1P55194 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm44229-201ENSMUST00000203211 2487 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
Sh3bp1P55194 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm43386-201ENSMUST00000199654 4001 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm26014-201ENSMUST00000104405 132 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm7091-201ENSMUST00000116438 586 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm9392-201ENSMUST00000119337 554 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm15836-201ENSMUST00000119952 793 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm22342-201ENSMUST00000122647 298 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm371-201ENSMUST00000142240 1245 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm22214-201ENSMUST00000157563 172 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm18349-201ENSMUST00000187440 904 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm8307-201ENSMUST00000187682 1150 ntBASIC8.3□□□□□ -1.08
Sh3bp1P55194 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms