Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 AC166574.5-201ENSMUST00000227438 1432 ntBASIC9.36□□□□□ -0.91
Msh6P54276 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Msh6P54276 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Msh6P54276 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Msh6P54276 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Msh6P54276 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 Gm26417-201ENSMUST00000104274 135 ntBASIC9.36□□□□□ -0.91
Msh6P54276 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Msh6P54276 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC9.36□□□□□ -0.91
Msh6P54276 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC9.36□□□□□ -0.91
Msh6P54276 Gm43595-201ENSMUST00000196464 1071 ntBASIC9.36□□□□□ -0.91
Msh6P54276 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.36□□□□□ -0.91
Msh6P54276 Gm19211-201ENSMUST00000200251 1206 ntBASIC9.36□□□□□ -0.91
Msh6P54276 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 Gm18907-201ENSMUST00000209719 932 ntBASIC9.36□□□□□ -0.91
Msh6P54276 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC9.36□□□□□ -0.91
Msh6P54276 Gm2089-201ENSMUST00000218294 479 ntBASIC9.36□□□□□ -0.91
Msh6P54276 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC9.36□□□□□ -0.91
Msh6P54276 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC9.36□□□□□ -0.91
Msh6P54276 AC159205.2-201ENSMUST00000223759 816 ntBASIC9.36□□□□□ -0.91
Msh6P54276 Gm37496-201ENSMUST00000191930 2509 ntBASIC9.36□□□□□ -0.91
Msh6P54276 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Msh6P54276 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Msh6P54276 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Gm39041-201ENSMUST00000205557 3902 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Msh6P54276 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Gm37706-201ENSMUST00000195379 2765 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC9.35□□□□□ -0.91
Msh6P54276 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Msh6P54276 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Klf10-202ENSMUST00000226363 2917 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Msh6P54276 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.35□□□□□ -0.91
Msh6P54276 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Msh6P54276 Gm2065-201ENSMUST00000194697 2757 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Msh6P54276 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Msh6P54276 Gm22438-201ENSMUST00000104049 132 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Gm26144-201ENSMUST00000104475 132 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Gm15188-201ENSMUST00000121264 704 ntBASIC9.35□□□□□ -0.91
Msh6P54276 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Trav8-2-201ENSMUST00000130122 337 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC9.35□□□□□ -0.91
Msh6P54276 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Msh6P54276 Gm27360-201ENSMUST00000183487 80 ntBASIC9.35□□□□□ -0.91
Msh6P54276 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC9.35□□□□□ -0.91
Msh6P54276 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC9.35□□□□□ -0.91
Msh6P54276 Gm18562-201ENSMUST00000209949 915 ntBASIC9.35□□□□□ -0.91
Msh6P54276 CT009713.5-201ENSMUST00000224508 909 ntBASIC9.35□□□□□ -0.91
Msh6P54276 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Msh6P54276 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Msh6P54276 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC9.35□□□□□ -0.91
Msh6P54276 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Msh6P54276 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Gm45807-201ENSMUST00000209142 2874 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 Gm25093-201ENSMUST00000103993 132 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Gm22781-201ENSMUST00000104083 137 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Gm25505-201ENSMUST00000157220 246 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Gm18808-201ENSMUST00000173316 462 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC9.34□□□□□ -0.91
Msh6P54276 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 AC124778.1-201ENSMUST00000216013 162 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms