Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 Gm27013-202ENSMUST00000205067 1436 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Ceacam19-201ENSMUST00000052605 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Rfx2-202ENSMUST00000086801 3278 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 Gm11318-201ENSMUST00000118640 961 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm14375-201ENSMUST00000119490 855 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC8.14□□□□□ -1.11
Sox1P53783 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gprasp2-211ENSMUST00000173804 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm28384-201ENSMUST00000189079 463 ntBASIC8.14□□□□□ -1.11
Sox1P53783 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Gm37727-201ENSMUST00000191637 819 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm37989-201ENSMUST00000195202 803 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC8.14□□□□□ -1.11
Sox1P53783 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.14□□□□□ -1.11
Sox1P53783 AC079644.2-201ENSMUST00000220581 322 ntBASIC8.14□□□□□ -1.11
Sox1P53783 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 AC154851.2-201ENSMUST00000222172 644 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Sox1P53783 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Sox1P53783 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
Sox1P53783 Gm29486-201ENSMUST00000088648 372 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Sox1P53783 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Sox1P53783 BC026762-201ENSMUST00000206555 2503 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Fabp12-201ENSMUST00000029043 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Cwc25-201ENSMUST00000018685 3105 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Gm37673-201ENSMUST00000194880 2451 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 Dsg3-201ENSMUST00000070892 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC8.14□□□□□ -1.11
Sox1P53783 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC8.14□□□□□ -1.11
Sox1P53783 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Gm10568-201ENSMUST00000193244 1634 ntBASIC8.14□□□□□ -1.11
Sox1P53783 Eif2b3-202ENSMUST00000106447 3754 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Sox1P53783 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC8.13□□□□□ -1.11
Sox1P53783 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Slc4a2-203ENSMUST00000115049 3924 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Ubqln3-201ENSMUST00000057254 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Gm16630-201ENSMUST00000180741 3257 ntTSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.13□□□□□ -1.11
Sox1P53783 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 Gja1-201ENSMUST00000068581 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Gsdmc3-202ENSMUST00000185526 2179 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 Gm19085-201ENSMUST00000188924 2162 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Sox1P53783 Gm11565-201ENSMUST00000105053 921 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Sox1P53783 Arhgdib-203ENSMUST00000111892 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Gm12104-201ENSMUST00000120359 979 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Gm11585-201ENSMUST00000120901 569 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Gm7494-201ENSMUST00000121248 441 ntBASIC8.13□□□□□ -1.11
Sox1P53783 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 Gm25413-201ENSMUST00000158544 312 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Gm23059-201ENSMUST00000158978 107 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Gm7420-201ENSMUST00000162836 842 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Sox1P53783 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.13□□□□□ -1.11
Sox1P53783 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC8.13□□□□□ -1.11
Sox1P53783 Gm28864-201ENSMUST00000189251 644 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Sox1P53783 Gm20819-201ENSMUST00000191091 925 ntBASIC8.13□□□□□ -1.11
Sox1P53783 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sox1P53783 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Sox1P53783 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms