Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Rfx3P48381 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx3P48381 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Rfx3P48381 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx3P48381 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx3P48381 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx3P48381 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx3P48381 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Rfx3P48381 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
Rfx3P48381 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.65□□□□□ -1.35
Rfx3P48381 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Rfx3P48381 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm24462-201ENSMUST00000102430 106 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm14645-201ENSMUST00000118597 417 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm12599-201ENSMUST00000120534 792 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm14749-201ENSMUST00000121269 333 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 BC002163-201ENSMUST00000121906 319 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm11895-201ENSMUST00000122165 467 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm22562-201ENSMUST00000157334 111 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm8529-201ENSMUST00000183298 745 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Mir6972-201ENSMUST00000184774 64 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm42424-201ENSMUST00000198319 376 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm42558-201ENSMUST00000200982 265 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm18207-201ENSMUST00000205486 526 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm40853-201ENSMUST00000221342 582 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Gm9255-201ENSMUST00000223225 581 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.64□□□□□ -1.35
Rfx3P48381 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Rfx3P48381 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Rfx3P48381 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx3P48381 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Rfx3P48381 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Rfx3P48381 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx3P48381 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx3P48381 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm16221-201ENSMUST00000117331 393 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm12365-201ENSMUST00000117931 568 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm11809-201ENSMUST00000120923 950 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm14380-201ENSMUST00000122298 431 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm24530-201ENSMUST00000157948 288 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm17149-201ENSMUST00000164712 375 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm24576-201ENSMUST00000175508 248 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx3P48381 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Ighv1-38-201ENSMUST00000192755 349 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm23011-202ENSMUST00000197855 275 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm5723-201ENSMUST00000203096 432 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm5586-201ENSMUST00000206264 795 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Rfx3P48381 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx3P48381 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC6.63□□□□□ -1.35
Rfx3P48381 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms