Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Rfx1P48377 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Rfx1P48377 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Gm37364-201ENSMUST00000192533 3920 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Rfx1P48377 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm37420-201ENSMUST00000195332 2912 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm24048-201ENSMUST00000102411 106 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm22661-201ENSMUST00000104192 132 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rfx1P48377 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rfx1P48377 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC9.18□□□□□ -0.94
Rfx1P48377 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm12584-201ENSMUST00000117109 1105 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm11763-201ENSMUST00000119964 312 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm11765-201ENSMUST00000121173 1205 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC9.18□□□□□ -0.94
Rfx1P48377 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm26000-201ENSMUST00000157991 107 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm23819-201ENSMUST00000158744 109 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm20452-201ENSMUST00000174686 513 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm5973-201ENSMUST00000178542 496 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC9.18□□□□□ -0.94
Rfx1P48377 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm6820-201ENSMUST00000188803 2173 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm37741-201ENSMUST00000191768 1256 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm37908-201ENSMUST00000195828 470 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm44395-201ENSMUST00000197056 153 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC9.18□□□□□ -0.94
Rfx1P48377 AC132412.1-201ENSMUST00000204155 2724 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm45084-201ENSMUST00000207096 1957 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm19233-201ENSMUST00000219772 936 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC9.18□□□□□ -0.94
Rfx1P48377 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rfx1P48377 AC122877.1-201ENSMUST00000228873 218 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rfx1P48377 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm5471-201ENSMUST00000072732 337 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rfx1P48377 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rfx1P48377 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC9.18□□□□□ -0.94
Rfx1P48377 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rfx1P48377 Gm44242-201ENSMUST00000204212 2721 ntBASIC9.18□□□□□ -0.94
Rfx1P48377 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC9.17□□□□□ -0.94
Rfx1P48377 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm37078-201ENSMUST00000193314 2009 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC9.17□□□□□ -0.94
Rfx1P48377 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
Rfx1P48377 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm8832-201ENSMUST00000119890 395 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm12005-201ENSMUST00000121451 379 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gm15529-201ENSMUST00000121833 994 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gm14328-201ENSMUST00000122178 408 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms