Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.02□□□□□ -1.29
Tnfsf4P43488 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Tnfsf4P43488 Gm10652-201ENSMUST00000199790 2622 ntBASIC7.02□□□□□ -1.29
Tnfsf4P43488 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Tnfsf4P43488 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Tnfsf4P43488 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Tnfsf4P43488 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Tnfsf4P43488 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Tnfsf4P43488 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Tnfsf4P43488 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Tnfsf4P43488 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm25178-201ENSMUST00000122633 325 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm21182-201ENSMUST00000178899 794 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm27018-201ENSMUST00000181136 225 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm37689-201ENSMUST00000193139 275 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm37349-201ENSMUST00000194205 624 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm43725-201ENSMUST00000200122 369 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm7542-201ENSMUST00000201140 777 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm18243-201ENSMUST00000220756 887 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 AC154687.1-201ENSMUST00000224875 677 ntBASIC7.01□□□□□ -1.29
Tnfsf4P43488 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Tnfsf4P43488 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Tnfsf4P43488 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm21036-201ENSMUST00000207544 2611 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7□□□□□ -1.29
Tnfsf4P43488 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Mir669e-201ENSMUST00000117003 119 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Gm15186-201ENSMUST00000119345 563 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Gm15079-201ENSMUST00000121943 216 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC7□□□□□ -1.29
Tnfsf4P43488 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7□□□□□ -1.29
Tnfsf4P43488 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC7□□□□□ -1.29
Tnfsf4P43488 Mir8095-201ENSMUST00000185103 129 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Gm28164-201ENSMUST00000190143 442 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Gm38078-201ENSMUST00000192771 392 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm45506-201ENSMUST00000211620 280 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm45712-201ENSMUST00000212417 335 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Rpl32l-201ENSMUST00000216127 399 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 CT572999.1-201ENSMUST00000220315 1260 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7□□□□□ -1.29
Tnfsf4P43488 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC7□□□□□ -1.29
Tnfsf4P43488 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Arhgef33-207ENSMUST00000224966 490 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 AC133189.3-201ENSMUST00000226269 878 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Tnfsf4P43488 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC7□□□□□ -1.29
Tnfsf4P43488 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7□□□□□ -1.29
Tnfsf4P43488 Mir484-201ENSMUST00000093566 67 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms