Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Gm24525-201ENSMUST00000082917 151 ntBASIC7.49□□□□□ -1.21
HttP42859 n-R5s36-201ENSMUST00000082998 119 ntBASIC7.49□□□□□ -1.21
HttP42859 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Gm43980-201ENSMUST00000204899 1612 ntBASIC7.49□□□□□ -1.21
HttP42859 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 Gm14521-201ENSMUST00000119545 350 ntBASIC7.49□□□□□ -1.21
HttP42859 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Gm24179-201ENSMUST00000158925 127 ntBASIC7.49□□□□□ -1.21
HttP42859 Gm18348-201ENSMUST00000191227 820 ntBASIC7.49□□□□□ -1.21
HttP42859 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.49□□□□□ -1.21
HttP42859 Gm4374-201ENSMUST00000204929 424 ntBASIC7.49□□□□□ -1.21
HttP42859 Gm44943-201ENSMUST00000207254 300 ntBASIC7.49□□□□□ -1.21
HttP42859 Gm19212-201ENSMUST00000216642 862 ntBASIC7.49□□□□□ -1.21
HttP42859 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.49□□□□□ -1.21
HttP42859 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
HttP42859 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
HttP42859 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC7.48□□□□□ -1.21
HttP42859 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.48□□□□□ -1.21
HttP42859 AC156950.1-201ENSMUST00000219604 456 ntBASIC7.48□□□□□ -1.21
HttP42859 CT030238.4-203ENSMUST00000227343 836 ntBASIC7.48□□□□□ -1.21
HttP42859 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
HttP42859 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.48□□□□□ -1.21
HttP42859 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
HttP42859 Gm44117-201ENSMUST00000204442 1758 ntBASIC7.48□□□□□ -1.21
HttP42859 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.48□□□□□ -1.21
HttP42859 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
HttP42859 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.48□□□□□ -1.21
HttP42859 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.48□□□□□ -1.21
HttP42859 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.48□□□□□ -1.21
HttP42859 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.48□□□□□ -1.21
HttP42859 Gm46223-201ENSMUST00000215196 675 ntBASIC7.48□□□□□ -1.21
HttP42859 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
HttP42859 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
HttP42859 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
HttP42859 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC7.48□□□□□ -1.21
HttP42859 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC7.48□□□□□ -1.21
HttP42859 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.48□□□□□ -1.21
HttP42859 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
HttP42859 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC7.48□□□□□ -1.21
HttP42859 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
HttP42859 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HttP42859 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.47□□□□□ -1.21
HttP42859 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Gm7825-201ENSMUST00000204046 416 ntBASIC7.47□□□□□ -1.21
HttP42859 Gm18690-201ENSMUST00000204488 985 ntBASIC7.47□□□□□ -1.21
HttP42859 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.47□□□□□ -1.21
HttP42859 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
HttP42859 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Gm38339-201ENSMUST00000195479 1829 ntBASIC7.47□□□□□ -1.21
HttP42859 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
HttP42859 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HttP42859 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms