Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Gm18024-201ENSMUST00000218516 690 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 AC116596.2-201ENSMUST00000226642 526 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 AC134577.2-201ENSMUST00000228541 715 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sdc1P18828 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm44509-201ENSMUST00000205400 1324 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm7364-201ENSMUST00000188760 1501 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Sdc1P18828 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.88□□□□□ -1.47
Sdc1P18828 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Sdc1P18828 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sdc1P18828 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm43775-201ENSMUST00000201019 3395 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.87□□□□□ -1.47
Sdc1P18828 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sdc1P18828 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm24472-201ENSMUST00000104484 132 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm6292-201ENSMUST00000120712 1095 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm14143-201ENSMUST00000121686 357 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm16027-201ENSMUST00000161618 758 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 AF067061-202ENSMUST00000181748 881 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm5839-201ENSMUST00000182835 1007 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm37851-201ENSMUST00000193871 889 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm17950-201ENSMUST00000214617 646 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Gm18623-201ENSMUST00000219860 953 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 AC124736.1-201ENSMUST00000226382 419 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Gm5564-201ENSMUST00000034916 967 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gzmk-202ENSMUST00000122399 1304 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm37163-201ENSMUST00000195439 1690 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC5.87□□□□□ -1.47
Sdc1P18828 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
Sdc1P18828 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Sdc1P18828 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Sdc1P18828 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sdc1P18828 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Sdc1P18828 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms