Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Col1a1P11087 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Col1a1P11087 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Col1a1P11087 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Gm14729-201ENSMUST00000118373 689 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.6□□□□□ -1.03
Col1a1P11087 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.6□□□□□ -1.03
Col1a1P11087 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Col1a1P11087 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Col1a1P11087 Gm7369-201ENSMUST00000192738 936 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC8.6□□□□□ -1.03
Col1a1P11087 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.6□□□□□ -1.03
Col1a1P11087 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.6□□□□□ -1.03
Col1a1P11087 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Col1a1P11087 Gm22684-201ENSMUST00000082849 132 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Col1a1P11087 Gm43411-201ENSMUST00000196235 1579 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Col1a1P11087 CT009757.4-201ENSMUST00000221520 2541 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Gm37373-201ENSMUST00000194005 2812 ntBASIC8.6□□□□□ -1.03
Col1a1P11087 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Col1a1P11087 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Col1a1P11087 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC8.59□□□□□ -1.03
Col1a1P11087 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm15310-201ENSMUST00000117891 372 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm11445-201ENSMUST00000119101 532 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm12844-201ENSMUST00000119463 582 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm13940-201ENSMUST00000121023 301 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm11472-201ENSMUST00000121305 556 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm11434-201ENSMUST00000122379 629 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm25395-201ENSMUST00000157343 272 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm26323-201ENSMUST00000157743 175 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Mir5617-201ENSMUST00000176786 57 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm8245-201ENSMUST00000182434 987 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm8183-201ENSMUST00000183134 980 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm7413-201ENSMUST00000219498 462 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm18620-201ENSMUST00000222295 324 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 AC122533.1-201ENSMUST00000225177 767 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Col1a1P11087 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.59□□□□□ -1.03
Col1a1P11087 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Col1a1P11087 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Gm43609-201ENSMUST00000199084 2712 ntBASIC8.59□□□□□ -1.03
Col1a1P11087 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Col1a1P11087 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
Col1a1P11087 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Col1a1P11087 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.04
Col1a1P11087 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.04
Col1a1P11087 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Col1a1P11087 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC8.58□□□□□ -1.04
Col1a1P11087 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Col1a1P11087 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.58□□□□□ -1.04
Col1a1P11087 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.58□□□□□ -1.04
Col1a1P11087 Gm13196-201ENSMUST00000118297 379 ntBASIC8.58□□□□□ -1.04
Col1a1P11087 Gm15568-201ENSMUST00000118589 1213 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms