Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm18876-201ENSMUST00000219985 1849 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm26890-201ENSMUST00000180681 3221 ntTSL 2 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Sele-201ENSMUST00000027874 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Afp-201ENSMUST00000042755 2063 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Krt222-201ENSMUST00000038214 2042 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Fam221b-201ENSMUST00000056474 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm20712-201ENSMUST00000176387 1491 ntBASIC6.84□□□□□ -1.31
Hoxd3P09027 Ccser2-207ENSMUST00000182797 1482 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC6.84□□□□□ -1.31
Hoxd3P09027 Mad2l1-201ENSMUST00000101343 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Hoxd3P09027 Gm44639-201ENSMUST00000205859 3009 ntBASIC6.84□□□□□ -1.32
Hoxd3P09027 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.32
Hoxd3P09027 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC6.84□□□□□ -1.32
Hoxd3P09027 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Hoxd3P09027 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Hoxd3P09027 Myo19-201ENSMUST00000020837 1669 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Hoxd3P09027 Gm8188-201ENSMUST00000219737 1690 ntBASIC6.84□□□□□ -1.32
Hoxd3P09027 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Hoxd3P09027 Vsnl1-201ENSMUST00000072299 1903 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Hoxd3P09027 Olfr718-ps1-201ENSMUST00000164536 3962 ntAPPRIS P5 TSL 5 BASIC6.84□□□□□ -1.32
Hoxd3P09027 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
Hoxd3P09027 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm5975-201ENSMUST00000185256 1399 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm19144-201ENSMUST00000221921 1859 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Def8-202ENSMUST00000065534 3127 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Sdhaf2-201ENSMUST00000025570 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Vmn2r56-201ENSMUST00000163852 2340 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Esr2-203ENSMUST00000110421 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm11487-201ENSMUST00000084480 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Asph-206ENSMUST00000103004 1762 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 AC115891.1-201ENSMUST00000215798 1755 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm44874-201ENSMUST00000206586 1542 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm2348-201ENSMUST00000108782 300 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm13254-201ENSMUST00000118295 654 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
Hoxd3P09027 H3f3c-201ENSMUST00000119459 411 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm11512-201ENSMUST00000119669 663 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm11461-201ENSMUST00000119909 387 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Amd-ps1-201ENSMUST00000120127 994 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm12877-201ENSMUST00000120383 510 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm14331-201ENSMUST00000120396 409 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm14125-202ENSMUST00000120921 756 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm12903-201ENSMUST00000121015 544 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm14383-201ENSMUST00000121637 386 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm7076-201ENSMUST00000152421 456 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm6851-201ENSMUST00000154478 395 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm14532-201ENSMUST00000156115 279 ntTSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm24734-201ENSMUST00000158860 262 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Mymk-202ENSMUST00000163967 1210 ntTSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm8358-201ENSMUST00000167222 555 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm3571-201ENSMUST00000170703 1060 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm8868-201ENSMUST00000173591 577 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm12728-202ENSMUST00000184254 234 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm27406-201ENSMUST00000184881 182 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm12728-203ENSMUST00000185012 234 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Cysrt1-203ENSMUST00000186719 909 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Olfr10-201ENSMUST00000187570 942 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm20954-201ENSMUST00000189078 644 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm37098-201ENSMUST00000192290 244 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms