Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm14762-201ENSMUST00000105109 1771 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm37043-201ENSMUST00000194609 3105 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm9256-201ENSMUST00000198106 1420 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Hmgb3O54879 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm14056-201ENSMUST00000117198 642 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm16523-201ENSMUST00000121253 592 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm14749-201ENSMUST00000121269 333 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm14983-201ENSMUST00000121551 323 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm15989-201ENSMUST00000121895 498 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 H2afy3-201ENSMUST00000151919 1112 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm24011-201ENSMUST00000157732 268 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm22262-201ENSMUST00000158713 86 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm29562-201ENSMUST00000190113 904 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC5.93□□□□□ -1.46
Hmgb3O54879 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm43247-201ENSMUST00000198638 481 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm9523-201ENSMUST00000199146 1159 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC5.93□□□□□ -1.46
Hmgb3O54879 AC121357.1-201ENSMUST00000227365 608 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Hmgb3O54879 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Hmgb3O54879 Neat1-201ENSMUST00000173672 20771 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm38288-201ENSMUST00000195330 1320 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 AC125074.1-201ENSMUST00000227970 1331 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.93□□□□□ -1.46
Hmgb3O54879 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm42653-201ENSMUST00000200644 2839 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 AC129085.2-201ENSMUST00000223763 2800 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC5.93□□□□□ -1.46
Hmgb3O54879 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Hmgb3O54879 Gm44228-201ENSMUST00000204888 2026 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Hmgb3O54879 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm23840-201ENSMUST00000116950 97 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm15422-201ENSMUST00000117453 541 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm12611-201ENSMUST00000119452 1037 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm22484-201ENSMUST00000157992 306 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm20702-201ENSMUST00000176181 460 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm25190-201ENSMUST00000176664 95 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 n-R5s115-201ENSMUST00000179019 119 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm27403-201ENSMUST00000184662 214 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm27972-201ENSMUST00000184720 137 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm5251-201ENSMUST00000188959 472 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC5.92□□□□□ -1.46
Hmgb3O54879 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC5.92□□□□□ -1.46
Hmgb3O54879 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm37481-201ENSMUST00000195176 403 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm5723-201ENSMUST00000203096 432 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm9240-201ENSMUST00000206527 742 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC5.92□□□□□ -1.46
Hmgb3O54879 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC5.92□□□□□ -1.46
Hmgb3O54879 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Hmgb3O54879 Gm46317-201ENSMUST00000221103 393 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 AC099629.1-201ENSMUST00000226778 464 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 AC154627.1-201ENSMUST00000228799 1286 ntBASIC5.92□□□□□ -1.46
Hmgb3O54879 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms