Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm28165-201ENSMUST00000190669 694 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm29181-201ENSMUST00000191288 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm38229-201ENSMUST00000191931 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm38177-201ENSMUST00000192213 1040 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm32347-201ENSMUST00000192944 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm38121-201ENSMUST00000193213 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm38035-201ENSMUST00000194427 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm38350-201ENSMUST00000194789 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm37990-201ENSMUST00000195821 696 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm43546-201ENSMUST00000196721 943 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm42584-201ENSMUST00000201404 220 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm42713-201ENSMUST00000202709 945 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm43928-201ENSMUST00000203737 409 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Gm45136-201ENSMUST00000205793 943 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Scn3aA2ASI5 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm11858-201ENSMUST00000117935 838 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm24286-201ENSMUST00000157632 128 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm26323-201ENSMUST00000157743 175 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm21054-201ENSMUST00000203981 380 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm2221-201ENSMUST00000209342 418 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm45432-201ENSMUST00000210391 416 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 AC153847.1-201ENSMUST00000214524 353 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm9800-201ENSMUST00000052615 336 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Scn3aA2ASI5 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm25344-201ENSMUST00000104503 132 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm25178-201ENSMUST00000122633 325 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm16027-201ENSMUST00000161618 758 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm5283-201ENSMUST00000177874 334 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm44566-201ENSMUST00000207638 304 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 AC163621.1-201ENSMUST00000220695 379 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms