Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm25852-201ENSMUST00000082790 130 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7□□□□□ -1.29
Trim3Q9R1R2 AC166341.5-201ENSMUST00000222206 1400 ntBASIC7□□□□□ -1.29
Trim3Q9R1R2 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim3Q9R1R2 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim3Q9R1R2 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm16418-201ENSMUST00000118577 171 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm15763-201ENSMUST00000120136 403 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm14826-201ENSMUST00000121284 901 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm22342-201ENSMUST00000122647 298 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm6931-201ENSMUST00000183103 371 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm38203-201ENSMUST00000191815 245 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm18972-201ENSMUST00000218873 630 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 AC139323.1-201ENSMUST00000223370 1040 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Mir135b-201ENSMUST00000083501 97 ntBASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim3Q9R1R2 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm22687-201ENSMUST00000158301 105 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm20797-201ENSMUST00000177894 383 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Mir6972-201ENSMUST00000184774 64 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm6610-201ENSMUST00000186324 358 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm28983-201ENSMUST00000186685 614 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm28150-201ENSMUST00000187305 614 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm28377-201ENSMUST00000189695 720 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm8489-201ENSMUST00000209876 1152 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm33778-201ENSMUST00000216884 704 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Gm6885-201ENSMUST00000217261 372 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 AC162183.1-201ENSMUST00000224843 472 ntBASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim3Q9R1R2 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms