Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm13776-201ENSMUST00000122236 1261 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm24530-201ENSMUST00000157948 288 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm5307-201ENSMUST00000204772 760 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm9354-201ENSMUST00000209075 468 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC6.94□□□□□ -1.3
Use1Q9CQ56 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm2915-201ENSMUST00000222565 787 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 AC163638.1-201ENSMUST00000224818 392 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Use1Q9CQ56 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.94□□□□□ -1.3
Use1Q9CQ56 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Use1Q9CQ56 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Use1Q9CQ56 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm13929-201ENSMUST00000117553 1125 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm15913-201ENSMUST00000118492 331 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm8662-201ENSMUST00000118644 574 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm13915-201ENSMUST00000119314 931 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm12632-201ENSMUST00000121223 495 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm23007-201ENSMUST00000158951 177 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm7436-201ENSMUST00000187229 391 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm38047-201ENSMUST00000193690 1133 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm43542-201ENSMUST00000199505 379 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm20223-201ENSMUST00000199932 805 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm18192-201ENSMUST00000210174 941 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 AC151904.2-201ENSMUST00000218683 1177 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.93□□□□□ -1.3
Use1Q9CQ56 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
Use1Q9CQ56 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms