Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Scrt1Q99M85 AC124675.1-201ENSMUST00000226263 1390 ntBASIC6.57□□□□□ -1.36
Scrt1Q99M85 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm13352-201ENSMUST00000117515 262 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm11880-201ENSMUST00000117612 399 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm16523-201ENSMUST00000121253 592 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm18875-201ENSMUST00000188563 882 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm29605-201ENSMUST00000190800 292 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm8539-201ENSMUST00000199822 501 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm3549-201ENSMUST00000203873 794 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm44245-201ENSMUST00000204304 232 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm4259-201ENSMUST00000206489 758 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm42972-201ENSMUST00000196937 5617 ntBASIC6.56□□□□□ -1.36
Scrt1Q99M85 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Scrt1Q99M85 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm6181-201ENSMUST00000117187 264 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm15105-201ENSMUST00000117777 204 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm13466-201ENSMUST00000121515 999 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm11188-201ENSMUST00000122382 388 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.55□□□□□ -1.36
Scrt1Q99M85 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Mir1932-201ENSMUST00000157390 90 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm24057-201ENSMUST00000158616 302 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm25164-201ENSMUST00000158908 116 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
Scrt1Q99M85 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm27373-201ENSMUST00000184017 184 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Mir6908-201ENSMUST00000184056 63 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm29464-201ENSMUST00000187692 513 ntBASIC6.55□□□□□ -1.36
Scrt1Q99M85 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms