Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm11926-201ENSMUST00000118520 430 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm11882-201ENSMUST00000121463 506 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm26357-201ENSMUST00000158218 115 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm7991-201ENSMUST00000168668 591 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm6536-201ENSMUST00000171180 615 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm20614-201ENSMUST00000177106 632 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm5147-201ENSMUST00000185999 794 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm33778-201ENSMUST00000216884 704 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm9249-201ENSMUST00000221420 578 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm20900-201ENSMUST00000078729 472 ntBASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Nup88Q8CEC0 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm5903-201ENSMUST00000121836 2325 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm15842-201ENSMUST00000120513 618 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm24782-201ENSMUST00000157641 132 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm22206-201ENSMUST00000158612 116 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm20111-201ENSMUST00000184830 319 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm27782-201ENSMUST00000185059 199 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.69□□□□□ -1.02
Nup88Q8CEC0 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Nup88Q8CEC0 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms