Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm14630-201ENSMUST00000118057 246 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm4891-201ENSMUST00000182279 912 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm8529-201ENSMUST00000183298 745 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm27595-201ENSMUST00000184579 112 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm38203-201ENSMUST00000191815 245 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm43555-201ENSMUST00000196588 310 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm5717-201ENSMUST00000198243 1062 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm7285-201ENSMUST00000198801 580 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Rpl32l-201ENSMUST00000216127 399 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm18378-201ENSMUST00000216245 628 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm18243-201ENSMUST00000220756 887 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm44620-201ENSMUST00000209183 2887 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Gm43577-201ENSMUST00000197090 3344 ntBASIC8.28□□□□□ -1.08
Ccdc38Q8CDN8 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.08
Ccdc38Q8CDN8 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Ccdc38Q8CDN8 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Ccdc38Q8CDN8 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Ccdc38Q8CDN8 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Ccdc38Q8CDN8 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm45512-201ENSMUST00000210432 1553 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm37278-201ENSMUST00000191619 2872 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm15422-201ENSMUST00000117453 541 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm11343-201ENSMUST00000120579 599 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm11258-201ENSMUST00000121086 1218 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm15079-201ENSMUST00000121943 216 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm25845-201ENSMUST00000122588 310 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm22687-201ENSMUST00000158301 105 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm2089-201ENSMUST00000218294 479 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms