Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Atg4aQ8C9S8 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Mir503-201ENSMUST00000102168 71 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm25083-201ENSMUST00000102319 92 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm3208-201ENSMUST00000168281 427 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm42696-201ENSMUST00000199859 1142 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm20223-201ENSMUST00000199932 805 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm4605-201ENSMUST00000203148 625 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 AC102582.1-201ENSMUST00000215376 378 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 AC139941.1-201ENSMUST00000221517 478 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm36758-201ENSMUST00000222594 310 ntBASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Atg4aQ8C9S8 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm25178-201ENSMUST00000122633 325 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm26357-201ENSMUST00000158218 115 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm7502-201ENSMUST00000169235 733 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm21430-201ENSMUST00000182998 998 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm28006-201ENSMUST00000183841 122 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm27401-201ENSMUST00000184052 173 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm44931-201ENSMUST00000206056 545 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm29977-201ENSMUST00000206804 724 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm45497-201ENSMUST00000211701 740 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.84□□□□□ -0.99
Atg4aQ8C9S8 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.84□□□□□ -1
Atg4aQ8C9S8 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm8812-201ENSMUST00000118496 412 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms