Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.1□□□□□ -1.11
Trim9Q8C7M3 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm12439-201ENSMUST00000117162 365 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm14201-201ENSMUST00000117627 289 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm14480-201ENSMUST00000118521 433 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm15160-201ENSMUST00000120553 907 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm12297-201ENSMUST00000121380 979 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Mir7011-201ENSMUST00000183768 73 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm6546-201ENSMUST00000192096 766 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm2505-201ENSMUST00000200413 825 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm20900-201ENSMUST00000078729 472 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim9Q8C7M3 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Trim9Q8C7M3 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Trim9Q8C7M3 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Trim9Q8C7M3 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm14248-201ENSMUST00000117790 544 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm13163-201ENSMUST00000119875 336 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm13525-201ENSMUST00000120607 478 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm11383-201ENSMUST00000121346 807 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm24893-201ENSMUST00000122745 369 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm26357-201ENSMUST00000158218 115 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm16027-201ENSMUST00000161618 758 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm45878-201ENSMUST00000211839 241 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim9Q8C7M3 Gm5791-201ENSMUST00000220840 489 ntBASIC8.08□□□□□ -1.12
Trim9Q8C7M3 AC157650.2-201ENSMUST00000224666 328 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms