Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Smcr8-202ENSMUST00000102667 3544 ntBASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm13196-201ENSMUST00000118297 379 ntBASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm11553-201ENSMUST00000120682 240 ntBASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm24286-201ENSMUST00000157632 128 ntBASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Gm18799-201ENSMUST00000189104 913 ntBASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 AC124395.1-201ENSMUST00000225940 707 ntBASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col16a1Q8BLX7 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 n-R5s16-201ENSMUST00000104555 119 ntBASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm5601-201ENSMUST00000118909 972 ntBASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm29385-201ENSMUST00000186831 363 ntBASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm43762-201ENSMUST00000201521 295 ntBASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm45626-201ENSMUST00000210093 361 ntBASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 AC154757.2-201ENSMUST00000228885 743 ntBASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm38173-201ENSMUST00000193126 2314 ntBASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col16a1Q8BLX7 Gm45746-201ENSMUST00000212623 2447 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Mir674-201ENSMUST00000102421 100 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm15310-201ENSMUST00000117891 372 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm13878-201ENSMUST00000117986 577 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm11796-201ENSMUST00000120208 972 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm12101-201ENSMUST00000121590 390 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm45485-201ENSMUST00000211229 357 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 CT025579.4-201ENSMUST00000224598 627 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 AC121997.2-202ENSMUST00000227158 939 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Mir106b-201ENSMUST00000083580 82 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 AC154270.2-201ENSMUST00000226755 2306 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm37372-201ENSMUST00000193577 3311 ntBASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC9.56□□□□□ -0.88
Col16a1Q8BLX7 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms