Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
H3f3aP84244 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
H3f3aP84244 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
H3f3aP84244 Gm20900-201ENSMUST00000078729 472 ntBASIC6.6□□□□□ -1.35
H3f3aP84244 Snora9-201ENSMUST00000082579 133 ntBASIC6.6□□□□□ -1.35
H3f3aP84244 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
H3f3aP84244 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
H3f3aP84244 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
H3f3aP84244 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.6□□□□□ -1.35
H3f3aP84244 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.6□□□□□ -1.35
H3f3aP84244 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
H3f3aP84244 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
H3f3aP84244 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
H3f3aP84244 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
H3f3aP84244 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
H3f3aP84244 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.59□□□□□ -1.35
H3f3aP84244 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
H3f3aP84244 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.59□□□□□ -1.35
H3f3aP84244 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
H3f3aP84244 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
H3f3aP84244 Gm14480-201ENSMUST00000118521 433 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm13038-201ENSMUST00000119886 459 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm15481-201ENSMUST00000120264 539 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm13525-201ENSMUST00000120607 478 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.59□□□□□ -1.35
H3f3aP84244 Gm22795-201ENSMUST00000157233 118 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm8046-201ENSMUST00000172151 616 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm20430-201ENSMUST00000172474 207 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 Gm7285-201ENSMUST00000198801 580 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm18690-201ENSMUST00000204488 985 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.59□□□□□ -1.35
H3f3aP84244 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.59□□□□□ -1.35
H3f3aP84244 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.59□□□□□ -1.35
H3f3aP84244 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.59□□□□□ -1.35
H3f3aP84244 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
H3f3aP84244 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
H3f3aP84244 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
H3f3aP84244 AC121286.2-201ENSMUST00000218069 2470 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.59□□□□□ -1.35
H3f3aP84244 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
H3f3aP84244 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
H3f3aP84244 Gm44178-201ENSMUST00000205229 2930 ntBASIC6.59□□□□□ -1.36
H3f3aP84244 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.59□□□□□ -1.36
H3f3aP84244 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
H3f3aP84244 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.58□□□□□ -1.36
H3f3aP84244 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
H3f3aP84244 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
H3f3aP84244 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm25276-201ENSMUST00000104300 124 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
H3f3aP84244 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm14248-201ENSMUST00000117790 544 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Gm11343-201ENSMUST00000120579 599 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm24139-201ENSMUST00000122780 288 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm26182-201ENSMUST00000157688 116 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Gm6428-201ENSMUST00000161062 345 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.58□□□□□ -1.36
H3f3aP84244 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm5575-201ENSMUST00000190879 398 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.58□□□□□ -1.36
H3f3aP84244 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.58□□□□□ -1.36
H3f3aP84244 Gm42573-201ENSMUST00000202327 478 ntBASIC6.58□□□□□ -1.36
H3f3aP84244 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms